USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: RET1_HUMAN USC-OGP 2-DE database:  RET1_HUMAN RET1_HUMAN General information about the entry View entry in simple text format Entry name RET1_HUMAN Primary accession number P09455 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Retinol-binding protein 1; AltName: Full=Cellular retinol-binding protein; Short=CRBP; AltName: Full=Cellular retinol-binding protein I; Short=CRBP-I;. Gene name Name=RBP1 Synonyms=CRBP1 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1336: pI=5.13; Mw=15865 Cross-references UniProtKB/Swiss-Prot P09455; RET1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name RET1_HUMAN Primary accession number P09455 Secondary accession number(s) A8K2Q0 B7Z7A0 E7EWV0 F2Z2F2 Q6FGX8 Sequence was last modified on  January 23, 2007 (version 2) Annotations were last modified on  March 15, 2017 (version 161) Name and origin of the protein Description RecName: Full=Retinol-binding protein 1; AltName: Full=Cellular retinol-binding protein; Short=CRBP; AltName: Full=Cellular retinol-binding protein I; Short=CRBP-I; Gene name Name=RBP1 Synonyms=CRBP1 Encoded on Name=RBP1; Synonyms=CRBP1 Keywords 3D-structure; Alternative splicing; Complete proteome; Cytoplasm; Methylation; Reference proteome; Retinol-binding; Transport; Vitamin A. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL M11433; AAA60257.1; -; mRNA EMBL X07437; CAA30318.1; -; Genomic_DNA EMBL X07438; CAA30318.1; JOINED; Genomic_DNA EMBL AK290315; BAF83004.1; -; mRNA EMBL AK301684; BAH13536.1; -; mRNA EMBL AK309492; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL CR541979; CAG46776.1; -; mRNA EMBL CR542005; CAG46802.1; -; mRNA EMBL AC046134; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL BC121052; AAI21053.1; -; mRNA EMBL M36809; AAA35714.1; -; mRNA CCDS CCDS46925.1; -. [P09455-2]; . CCDS CCDS46926.1; -. [P09455-3]; . PIR S00399; RJHUO; . RefSeq NP_001124464.1; NM_001130992.1. [P09455-3]; . RefSeq NP_001124465.1; NM_001130993.1. [P09455-2]; . RefSeq NP_002890.2; NM_002899.3; . UniGene Hs.529571; -; . PDB 5H8T; X-ray; 1.21 A; A=2-135 PDB 5H9A; X-ray; 1.38 A; A=2-135 PDB 5HA1; X-ray; 1.35 A; A=2-135 PDB 5HBS; X-ray; 0.89 A; A=2-135 PDB 5LJB; X-ray; 1.26 A; A=1-135 PDB 5LJC; X-ray; 1.43 A; A=1-135 PDB 5LJD; X-ray; 1.61 A; A=1-135 PDB 5LJE; X-ray; 1.40 A; A=1-135 PDB 5LJG; X-ray; 1.15 A; A=1-135 PDB 5LJH; X-ray; 1.52 A; A=1-135 PDB 5LJK; X-ray; 1.70 A; A=1-135 PDBsum 5H8T; -; . PDBsum 5H9A; -; . PDBsum 5HA1; -; . PDBsum 5HBS; -; . PDBsum 5LJB; -; . PDBsum 5LJC; -; . PDBsum 5LJD; -; . PDBsum 5LJE; -; . PDBsum 5LJG; -; . PDBsum 5LJH; -; . PDBsum 5LJK; -; . ProteinModelPortal P09455; -; . SMR P09455; -; . BioGrid 111881; 11; . IntAct P09455; 2; . STRING 9606.ENSP00000232219; -; . DrugBank DB00459; Acitretin; . DrugBank DB00162; Vitamin A; . PhosphoSitePlus P09455; -; . BioMuta RBP1; -; . DMDM 132387; -; . EPD P09455; -; . MaxQB P09455; -; . PaxDb P09455; -; . PeptideAtlas P09455; -; . PRIDE P09455; -; . DNASU 5947; -; . Ensembl ENST00000492918; ENSP00000429166; ENSG00000114115. [P09455-3]; . Ensembl ENST00000617459; ENSP00000477621; ENSG00000114115. [P09455-2]; . Ensembl ENST00000619087; ENSP00000482165; ENSG00000114115. [P09455-1]; . GeneID 5947; -; . KEGG hsa:5947; -; . UCSC uc011bmx.2; human. [P09455-1]; . CTD 5947; -; . DisGeNET 5947; -; . GeneCards RBP1; -; . H-InvDB HIX0030850; -; . HGNC HGNC:9919; RBP1; . HPA CAB018603; -; . HPA CAB019276; -; . HPA HPA007338; -; . MIM 180260; gene; . neXtProt NX_P09455; -; . OpenTargets ENSG00000114115; -; . PharmGKB PA34286; -; . eggNOG KOG4015; Eukaryota; . eggNOG ENOG4111US8; LUCA; . GeneTree ENSGT00760000118898; -; . HOGENOM HOG000004831; -; . HOVERGEN HBG005633; -; . InParanoid P09455; -; . PhylomeDB P09455; -; . TreeFam TF316894; -; . BioCyc MetaCyc:ENSG00000114115-MONOMER; -; . Reactome R-HSA-2453864; Retinoid cycle disease events; . Reactome R-HSA-2453902; The canonical retinoid cycle in rods (twilight vision); . Reactome R-HSA-975634; Retinoid metabolism and transport; . GeneWiki RBP1; -; . GenomeRNAi 5947; -; . PRO PR:P09455; -; . Proteomes UP000005640; Chromosome 3; . Bgee ENSG00000114115; -; . CleanEx HS_RBP1; -; . ExpressionAtlas P09455; baseline and differential; . Genevisible P09455; HS; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0005654; C:nucleoplasm; IDA:HPA; . GO GO:0016918; F:retinal binding; IEA:UniProtKB-KW; . GO GO:0005501; F:retinoid binding; TAS:ProtInc; . GO GO:0019841; F:retinol binding; IEA:UniProtKB-KW; . GO GO:0005215; F:transporter activity; IEA:InterPro; . GO GO:0002138; P:retinoic acid biosynthetic process; IEA:InterPro; . GO GO:0001523; P:retinoid metabolic process; TAS:Reactome; . GO GO:0006776; P:vitamin A metabolic process; TAS:ProtInc; . Gene3D 2.40.128.20; -; 1; . InterPro IPR012674; Calycin; . InterPro IPR011038; Calycin-like; . InterPro IPR031264; CRBP1; . InterPro IPR000463; Fatty_acid-bd; . InterPro IPR031259; iLBP; . InterPro IPR000566; Lipocln_cytosolic_FA-bd_dom; . PANTHER PTHR11955; PTHR11955; 1; . PANTHER PTHR11955:SF119; PTHR11955:SF119; 1; . Pfam PF00061; Lipocalin; 1; . PRINTS PR00178; FATTYACIDBP; . SUPFAM SSF50814; SSF50814; 1; . PROSITE PS00214; FABP; 1; .

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• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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